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Acidithiobacillus_ferroxidans_complete-all-Pathways.tbl (128.4 kB)
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Acidithiobacillus_ferroxidans_complete-all-Reactions.tbl (4.13 MB)
.RDS
Acidithiobacillus_ferroxidans_complete-draft.RDS (237.57 kB)
.RDS
Acidithiobacillus_ferroxidans_complete-rxnWeights.RDS (107.43 kB)
.RDS
Acidithiobacillus_ferroxidans_complete-rxnXgenes.RDS (533.59 kB)
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Acidithiobacillus_ferroxidans_complete-Transporter.tbl (98.07 kB)
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Acidithiobacillus_ferroxidans_complete.fasta (2.88 MB)
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Ferroglobus_placidus_complete-all-Pathways.tbl (117.53 kB)
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Ferroglobus_placidus_complete-all-Reactions.tbl (2.16 MB)
.RDS
Ferroglobus_placidus_complete-draft.RDS (140.56 kB)
.RDS
Ferroglobus_placidus_complete-rxnWeights.RDS (91.66 kB)
.RDS
Ferroglobus_placidus_complete-rxnXgenes.RDS (250.66 kB)
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Ferroglobus_placidus_complete-Transporter.tbl (83.52 kB)
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Ferroglobus_placidus_complete.fasta (2.12 MB)
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Hydrogenobacter_thermophilus_TK-6_complete-all-Pathways.tbl (126.01 kB)
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Hydrogenobacter_thermophilus_TK-6_complete-all-Reactions.tbl (3.15 MB)
.RDS
Hydrogenobacter_thermophilus_TK-6_complete-draft.RDS (204.31 kB)
.RDS
Hydrogenobacter_thermophilus_TK-6_complete-rxnWeights.RDS (98.05 kB)
.RDS
Hydrogenobacter_thermophilus_TK-6_complete-rxnXgenes.RDS (348.73 kB)
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Hydrogenobacter_thermophilus_TK-6_complete-Transporter.tbl (69.25 kB)
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Trophic State Prediction Training set
The training set used to construct the trophic state model. This includes the following:
1) Pathways of each reference genome
2) Transporters of each reference genome
3) Genome sequence of each reference genome, which was given as the input for Gapseq analysis
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