Test Data for Galaxy tutorial "Batch Correction and Integration" - Seurat version
dataset
posted on 2025-04-28, 09:23authored byMarisa Loach
This data is used for the Seurat version of the batch correction and integration tutorial on the Galaxy Training Network.
The input data was provided by Seurat in the 'Integrative Analysis in Seurat v5' tutorial. The input dataset provided here has been filtered to include only cells for which nFeature_RNA > 1000. The other datasets were produced on Galaxy.
The original dataset was published as: Ding, J., Adiconis, X., Simmons, S.K. et al. Systematic comparison of single-cell and single-nucleus RNA-sequencing methods. Nat Biotechnol 38, 737–746 (2020). https://doi.org/10.1038/s41587-020-0465-8.